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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0307156, CG1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPALSKLAN NQSAIVGVAG MTAALWIIAY GKMSNKKRKP GYEDKIQYTI AEKKDKKAGK  60
   61 AHVNSVFFKQ LRQLLPILIP GFWSVETGLL FLVAAALIGR SVSDIWMIQN ATVVESTIIH 120
  121 MNRTKFKTAL LKYLTALPAI SVVTNVLKWS LGELKLRFRT NLTHHLYSQY LNGYTYYKMS 180
  181 NLDNRIANAD QLLTTDIDKF CESATDLYSN ISKPVLDIFI YVYRLTVNLG GKTPSILMLY 240
  241 LLFAGVFLTR LRRPTGRLTV EEQKLEGEFR YVNSRLITNS EEVAFYQGNV REKLTLLASY 300
  301 SKLRSHLRKF LEFRVSMGII DNIIGKYFAS IVGFYAVSIP FFSENHPLLS GENSGQRLQA 360
  361 YYTYGRMLVK LAEAIGRLVL AGREMSRLAG FTARMTELIK VLSDLNKGTY ERTMVNGNNL 420
  421 AQNAVGSASS NFGPNKGIMC FEDNIIRFEK VPLVTPNGDV LLQELSFEVK SGTNVLVCGP 480
  481 NGCGKSSLFR ILGELWPTWG GKVTKPSRGK LFYVPQRPYM TLGTLRDQII YPHTRDDMRR 540
  541 LGHSDEDLMH YLDIVQLTYL EQRENGLDSI EDWIDVLSGG EKQRIAMARL FYHKPQFAIL 600
  601 DECTSAVSVD VEGKMYSYCR EVGITLFTVS HRKSLWAHHD YYLQFDGRGS YEFATIDQDK 660
  661 DHFGS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle