YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0310499
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPQLMSQME NGGEEEGCRL ECKEMDPLRL TTLILSADPR YRIKPMQQVV SALVGGLITT  60
   61 FVVTPLEVVK TRVQTQHAIR QRPTVSKLCY VYHNGLMTHV CRSSDICVPK PGRDPQNLRP 120
  121 LRGAMDAFVK IVCTSGFSGL WAGLSPTLVS ALPSTIIYFL TYEYIKNSLS HIYLVSQKFE 180
  181 ESGMKDQVPG ADGGDPLDQA TRGINVSATA PVSTASLPYY VPMASGICSR TIVVTAITPI 240
  241 EMVRIKMQSE YMTYAELWRV LRSLIRQHGI LGLWRGWPPT VMRDAPFSGT YWAVYEAIKR 300
  301 AFSVTEPTFL FSFLTGAISG AVGEGEQCSA THRKP

Type	Start	End	Confidence
Cytoplasmic	1	127	0.63
Transmembrane Helix	128	149	0.54
Non-Cytoplasmic	150	335	0.63