YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG7349-PA, FBpp0...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLLRRQPRL LNKRSTWLFR NYVLANRDVS EPVSRPAAPM STLSIPGPAL AAATPVSAVS  60
   61 LVPRCTHSSL QGGGQGAGGR GLRGSATGGS AAGGIATKRQ YSGGAAPAGA AKPGGAAPAG 120
  121 AAKPGGAAPA GAAKPGGAAA AAAGSAKPGG ASTGKPASGN APATPPPPPP PPPAKSAPPV 180
  181 KAKKPRLKTF EIYRWKPGDQ PQTQTYEVDL EQCGAMVLDA LIKIKNEMDP TLTFRRSCRE 240
  241 GICGSCAMNI NGTNTLACVS SIDQNESKCC RIYPLPHLYV VRDLVPDMSQ FYDQYRSIQP 300
  301 WLQRKDLKRE AGTAQYLQSV DDRLVLDGLY ECILCACCQT SCPSYWWNSN KYLGPAVLMQ 360
  361 AYRWVIDSRD EATEQRLDFL KDPWKLYRCH SIMNCTNTCP KHLNPARAII QLKQLLVGLK 420
  421 KKGKPQLKTD ALFAGKA

Type	Start	End	Confidence
Signal Peptide	1	51	0.55
N-region	1	42
H-region	43	48
C-region	49	51
Cleavage Site	51	52
Non-Cytoplasmic	52	437	0.99