YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG7772-PA
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.42
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEDKQFIRR DKGTKKTSTS LKEVDIYRDT FIRYMGYSNE IGESFRPLVP KSLVAASYGM  60
   61 AIGYVCTDTF DKALRLQMEG ASSREVAVKG GDVFCWQMLA SVAIPGLVIN RITWATKTLL 120
  121 SKAPMPVLKT VPTLVGLASI PLIIHPIDSM VDRLMDATYR KTVR

Type	Start	End	Confidence
Cytoplasmic	1	92	0.62
Transmembrane Helix	93	114	0.64
Non-Cytoplasmic	115	126	0.57
Transmembrane Helix	127	147	0.69
Cytoplasmic	148	164	0.42