YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22832460, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWPTTRSSSR RRWRRRSKWT SSRPICSTSI ARCWRTDSPR FVLSELGHAD KLHNMPDNNA  60
   61 LAGLCDGMVK AWDIYAKPQA VILFIIEDVS YNICDQRFHE FYIRETYPHI KVLRRTLTEV 120
  121 HREGKLGQSK ELLLGSQEVA VIYFRAGYEP GHYHSQADWD ARYLMETSLA IKCPSIHYHL 180
  181 AGTKKVQQAL AQPAVLERFI NDPEEIKAVG KIFTGLYSLD DNEAGNASYE MALRTPERFV 240
  241 LKPQREGGGN NVYGVDIPDA LKRMSRVERS AWILMDLIHP PLTKGYMVRP GGDMPPQIVD 300
  301 MVSELGIFGV VIGDAEHIVH NYQAGHMLRT KLSTANEGGV AAGLGALDSP YLIDSDDEDE 360
  361 QK

Type	Start	End	Confidence
Signal Peptide	1	33	0.75
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	362	0.99