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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7293308, gi|2...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEHQRPDHM AELVAISPER RNWRGIFIAL LVIAAVFSLI IFSIFLLSPE DEGLRIRGRR  60
   61 MLPSDILGRS LQWKPFNGTW SNGRELIYRD PTGGLSILNM ADLTTRILMT NSTFRQLNAE 120
  121 SFLVAPDQKY VLLQSDSNAE GSRHHVYEVQ TANTFPLGPT ENIAEAPRLQ HVVWAPANPP 180
  181 PPLGAPPPSG ASGASGASGA STTTMAPLPS GSIILNSLAG AANGPASAGA SGSSAPNPNG 240
  241 KAGGYNLNQA IAFVHHNDIY YKPKVQGELV CRITQTGSGS LEGESTGVVF NGVPDWMYEN 300
  301 VPELESRRSS MEFSPDGLFL AFLSYNDSEV NEYKYTWMGD DIKYPAVMSQ RYPKTGSRNP 360
  361 NVTVNVVNLS VIKYIFPTQI KLPSELSNGS YVGGLTWASS TDLSVTVTNR EQTKATTVLC 420
  421 RAPHFHCQAV HTEVTINDGW VLPSERPIFS VRNQGHNRLG KMVQNAEEIQ AESQNVNVTD 480
  481 GQTHTTHEIS NGGYLLKRLP VRDGEHGHYR HVVFISSLDR RPVPLTMGRF EVTEIVGWDE 540
  541 PHEIVYFMAA PEKRPGERHL YKISLKLNVT ESNRTYITST SPTCLTCDNT ESTYRLHRAR 600
  601 ISQRGDRWED IVARLEPDDC LYDIPKNCLF NRVQFSQDYS YYVQECLGPE APSVYLVETA 660
  661 SNDKIYVLNA GDVLRHRLSQ LAIPQSRTFS VEIRHGFHAQ VRLFLPPGMR EEEDVAFPLV 720
  721 LHVDASPGSQ LVTERFHVDW NWYLASQRSF IVAQIDGRGS GFQGELLRTQ VHGKLGTVEV 780
  781 EDQLGVLTYL RDNLKFIDPL RICAFGWGYG GYASSMMLID DSQQVLQCAV AINPIVNFGF 840
  841 HYSFFTERYI PLKGDYLRAL QEADLTMKAG NIKGRNLMLM HGTADTLVHQ EHTLMLVRAL 900
  901 VEQQVKFRHQ VYPDEDHAIA RSLSHVYKTM EWYFDECFGP VDDNEWDPTG LFLSDIDIGP 960
  961 ATDAHPDADA AGDSAGSNLS TLLTATTTSA SLSALDELDN RLQALDLITS STATTLSKVA1020
 1021 GKLCNYSSKR RLHQSEAVLA QKSRILQH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle