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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG4829-PC, CG4829-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVHHSNEDAM NKIPLKSAGG LDSDEEKNGG ELMQDTAAAE EARREQMRVK VLAWMKKLTI  60
   61 VLICFIGIAL ISYVIISLCF SDWPKSTPNR NNTTTATTTT ATPTTISTEA TITTIAPSGL 120
  121 ATTISTSTTT IATSATQQPP TATTTTTATR TTTTSRTDSN PSPTPKTFHL TDDEQQQEPE 180
  181 TETDNIGNLN LGITSTATTP SDDVLPNVAA STAATTAAPP TWLADQIKID TSEQYNSILG 240
  241 VYQHGAVSSD NLECSKIGSG ILQKNGSAVD AAIAALLCNG LLTLQSMGIG GGHLMNVYNR 300
  301 KERHATAIDA REVAPYEATE DMFAQQPENS DKGPLSIAVP GEVMGYHVAH QKFGQLPWAE 360
  361 LVAPSLELCE KGYHVSQHME RALDIALPYI KEHEQYQIYL NAETGKPHVA GTVVKPPKNL 420
  421 CKTYKLLAEN GPMDMYNGTI AKLLAEDLQD MGSIILADDL ESYEADVINS ITMDLGDDTL 480
  481 YVVPPVSSGS VVAHVLAILQ GYNFTAQDLS TEELKARTIH RFAEAMKFAF AQRPELGDMH 540
  541 FIDARELVSR LNSPDFGDQN RAKINDSHVL PDAQAYGANF AAIEDLDGTS NLVVLAPNGD 600
  601 AVSVTSSINS YFGSGLIGPR TGIVLNNGMN DFAVKNNIFA LPQSQSNKIE AHKRAMSSQS 660
  661 PILLADKDGN MKMVIGAAGG SKIIPAVVEV AANVLWFGKD LRQAVDAPRF YHQLMPDVLE 720
  721 YEEDGFTESL LQLLTKRGHK LKSISVKTGS VVTAISRNAT AIYANADYRK RGGVAGF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle