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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG4301-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFFGHDHLS GFRRIDRLGA HRQTPWADQE SFHLKDAFLW NWHKGSRVST INDWLQIQIG  60
   61 GPQDIKKKRP KGQNRIKSTK YTLITFLPQN LLEQFRRIAN FYFLVMTIIS LLIDSPVSPM 120
  121 TSLLPLVFVI AVTAAKQGYE DILRYRTDNV VNSSPVTVIR DGKEAIIKSQ DVIPGELIVV 180
  181 ERDCDVPCDL VLLRSTDPHG KCFITTANLD GESNLKTLMV PRDLPTVDLP EMHKLGIIEC 240
  241 ESPTTDLYSF NGKIELKGGE GRVLPLSTEN VLLRGSRVKN TECVIGCAVY TGMISKLQLN 300
  301 SRLTRNKNAS SETYINRFLI VILVALIAIV TLLYFLKRYN ELFVIPKLTY LGDATDSYSV 360
  361 KQFLQDYLSF LILFNYLIPI SLYVTIELQR VIGSWFMEWD LELYENETDQ PCVVNTSNLN 420
  421 EELGQINILF SDKTGTLTKN EMNFQQCSIN GNKFLFKKTR LEDEETKALL DINKFSANQR 480
  481 VFFQALSICH TVQVASGSLE QADAGTAKRE PVTAIKSGPP EMYSISDITE ESHNASQQSE 540
  541 LNVGHTIDNS VSAHPNGVNS TIISSDVNPL LVSDDGYGVE RRKRPVVIKR SPNFARSNRM 600
  601 NNGAASDLNI NQTDPNTVTN GVEPTTNFRP ISLQFRRSTS EKDLQQSWEA PSGQAPGHRR 660
  661 AHSYGAPNAY LTNPVTASTP PAGVLFRSPS TTSRESYAAP TFTRQPTILV RAESQRRKNE 720
  721 IRDFIFTLDY QASSPDEKAL VEACANLGMV YTGDDDETLR VRIVPPHMDY KRPFAKPREE 780
  781 TFQRLHVLEF TSDRKRMSVI VRDTDGKKWI YTKGAESYVF PLCANSSAEL VTKTDAHISD 840
  841 FARLGLRTLA IARRLISEEE YQDFLVELAQ ANSSLENRKQ LSEECYAKIE SNLDLLGATA 900
  901 VEDALQDDVA DTLVSLQAAG IKIWVLTGDK VETALNIALS CGHIPPDAKK YFIMECKNRE 960
  961 EMLLHLNALD REIIFGIGQE CALLIDGKSL GVALAEASSE FRDVAVKCTA VLCCRLSPLQ1020
 1021 KSEVVSLIKS SNENYNTASI GDGANDVSMI QEAHVGIGIM GREGRQAARC ADFAFAKFCM1080
 1081 LKRLLLVHGH YHSVRLSLLV LYFFYKNIVF MGIMFLFQFH TLFSSSSVYD SLFLTLYNVI1140
 1141 YTSLPILFIA ISEKPYTEEK LMRTPQLYKK NTDNKQLHWP YFLMWVLFAI YHSVIIFYFA1200
 1201 FCFFYYNNVL LNYGQTVAFS CFGTLLMWTV VVVVNLKLWL ESMYLSFWYI FTIIISILGF1260
 1261 VVTTVIYNVI NLDYDTDIYW AYNNLLASLP VWLWIIVTCV ACLVPDYTIR MLQRALNIKS1320
 1321 FSIFPGKQRK LKMREKFEST YL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle