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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG9981-PA, FBpp0...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGADKKKSAD PLRIQIGGIE SRQQKPLNRV TTTKYTWFTF LPLNFYEQFR RAVYFYFLII  60
   61 TIVSFFVNET ISPLVSLLPL LFVMIITALK EGLEDYSRSK SDKLVNTARV TVIRNGKEEI 120
  121 INSQFIVPGD LVVVRNDGDV PCDLVLLQSS SADRKCFVNT ANLDGETNLK TICVPTNYLL 180
  181 AGDHELQGKD CIVCEPSSAD LYTFNGRLEL RSGNDGAGSS AGDALPLTID NLLLRGVRVK 240
  241 STERVVGCAI YTGMHTKLQL NSRYTGNKSA SSEKYINRFM VALIVGMIVV VVVLYLIERH 300
  301 KEAKIVPTMP YQGPPTNFNS AWQIFEDFLS FLLLFNYMVP ISAYMNIEVY RIFGMHFMHN 360
  361 DLHLYDEETD QPCRVNASNL NEELGQVNIL FSDKTGTLTK NLMKFVNCYV PGTNYQLQNT 420
  421 HLVSEGTDEK FELEKLDADA AVLFEALAVC HTVEVLQEVG DKTLESSESV SEQSHLMSRN 480
  481 IVDRYQASSP DEKALLEGCA SLGLVYEGQE NDVLSICRYP SAEKVQFKRL HVLEFSSERQ 540
  541 RMSVIVRDQS DTIWLYSKGA ESAIFPRCKA SPLVEQTDAQ ITKYAQNGLR TMAVGRRMLT 600
  601 DDELFHFEEL YRKANTQLSN RNELIASCYE TVENELDLLG ATALEDALQE HVGETLEALQ 660
  661 AAGLKIWVLT GDKVETAYNI GLACRHIPRG SKQHFIINTT EPAELLARLD MIGDDEPEVL 720
  721 IVDGTTITAL LEHTPRQFAD LALRCRAVLC CRLSPLQKSE IVTLIKRRKK YITAAIGDGA 780
  781 NDVSMIQEAH IGIGITGREG KQAARCADFS IARFEMLRRL FLVHGHYNSQ RLAFLVLFYC 840
  841 YKNIIITGCM ALYQVYDLYS ATNVYNSIYL WLFDIVYISF SFTVLAICDK DYSEETLLSH 900
  901 PELYKPLAHN RQASMGVFSL WILNGFVQCF IIFFFTYAML NDANVLFNGG QTASFQTFGT 960
  961 MLITIIVIVG NLKLLLVAHY MTYRNFAMIL ASIAAFMLTT YLYNLYTSGE LYDVYNQFLS1020
 1021 SLPIWLFTII CSVACLLPDF VIKVVNDMYR KVPLKSKPVV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle