YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|220948008, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNKIEVSLP EEELDWIQLR QDLGPVAEVE TTKEKLQRKI KENPLVPLGC LATTAALTAG  60
   61 LYNFRTGNRK MSQLMMRSRI AAQGFTVMAL VVGVVMTYTD KK

Type	Start	End	Confidence
Cytoplasmic	1	44	0.89
Transmembrane Helix	45	64	0.76
Non-Cytoplasmic	65	79	0.67
Transmembrane Helix	80	99	0.94
Cytoplasmic	100	102	0.66