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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Ac13E-PB, Ac13E-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPGVLVNDS RANSTDDIQI ALAPHIQTYL SQTGRRHSCC SVMLPVAFER AAAKSWLDPK  60
   61 FDSPVLEEQY QASVFPHVRM RYRFTLSYIL LCSLMWCLYF VVDGGSEDFW RPISSSFSML 120
  121 SLVTIMALCF THWDLYREHR TVTSAVTALL LCGASLAFLT YTGRAFSPLG HFAICLEIVL 180
  181 LIYTALPMPL WLGASTAISY SIAFEMVSHM VIGCSAIHGG PMHGGGGAAG GSGMEANGDP 240
  241 SNRILILRIM AHLSVHLVGV HVLIMNLVRM RGTFMKVGQN LLVRRQLEME KQLKEKMIHS 300
  301 VMPPKVADML LNEGGPSGLD AGGLPPESHY MRPRASNDVK SLFRPFHMHS MENVSILFAD 360
  361 IVGFTRMSST KTAEQLVEIL NDLFERFDDL CSLSGCEKIS TLGDCYYCVS GCPEPRADHA 420
  421 ICCVEMGLGM IDAMRCFDAQ RHEGVKMRVG VHTGTVLCGI VGTRRVKFDV WSNDVSLANK 480
  481 MESSGKPEQV HISQETSSFL GDAYYLEEGE EVFGHRTYFV VGRRRDFTRT NSLSPSMPAN 540
  541 ATGSSLLLPG AHGASLSQSA TNVSAVQPNV PPASPVGQLS SSLNPSPVLS MRPRLTSLSM 600
  601 KMRKKSQSRD RDVERGIIHP AAAGIPPVIV VRERPKIIIT TKSLPGSLDS DEQPPVSPPL 660
  661 LPPANPPAAE TRSKIKLKVW KIPRFLKRFE DLTNRSSCGG SSSAGHLDKE REREREKEKE 720
  721 ELHQHNQLNP EETLAFMDNQ MQNGNGCGYQ QLPVLVESNH RTQTLDIPAA RPVLHHAATS 780
  781 TALASSVLRS PEAGVSGGGG CCSPGQYSMY DDIIDVRSYI SQSRSDISPF GRSGSYRSQC 840
  841 GRQSTGGVNG AGPAGVGAEG RAGTSQTAPP VEQSPLPRPR ASTLATGRPT PNSLEPGPSS 900
  901 TSPCCLPAPG NSVGGGGIFP PTHSRQSSIC PSATSRKDSG IKSNSRRSSI QQQIYALNQT 960
  961 AISQHRVSGY FTSSTSSISN LGEVQGLGLP LAVQPPPPLL MPACSSQMAD PLAACLQQLR1020
 1021 KQSDLQLIRC VRDNARSQRS YLVKPPLRKF SLYFKSRQLE RDFRSKAHRF GAENETEGPP1080
 1081 TLATPRYNTY IDIFVGIAVY LCISVSLFLM TQNTVSPSFR LWVTLFSCFT GIQVFALFLF1140
 1141 TRQMCRRQSG SNVSNRFRSK STTSEDLERD ERGAAPGGRP HFESCADRIF EAISSWYPWH1200
 1201 ICLAVLMAMP VLLIIANFLL LDLEQLEAFE YHYGFLIFVC IVHFCNFTQL NCWVRNVLAF1260
 1261 LAALCFIGIA VSQLMVYSHN RSDQQQDQEA SNFIQEIKWF QDYHVEIYLD LLLILVLVWF1320
 1321 LNREFEIGYR LTFYGNAVAN QDKVRVQNMK NQADMLLHNI IPKHVAEHLK NTAKYSENHH1380
 1381 NIAIIFASIV NFNEMYDESY LGGKEFLRVL NELIGDFDEL LSRPEFRAVE KIKTIGSTFM1440
 1441 AASGLDPSHR GTGDEHIHTL MEFSIAMQEV VDAFNKDLLE FNLILRIGMN IGDVTAGVIG1500
 1501 TSKLYYDIWG DAVNVASRMD STGLPNRIQV GKDCLPFLTN RYEFEPRGSV YVKGKDHMEV1560
 1561 FLYTTRRDNP LDDDEADKVE QLGTKKMEHE GRDEDVVQGE QQAEDKDEEE EEEEEDDDLH1620
 1621 SSETTTLFKS QESLQANGGS HLAPNAAATS HTHTITLTNN NNHNSSNINN NIATSNTTTT1680
 1681 ANNNSMPVET 

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