YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG12398-PA
Protein type: Transmembrane
Type Confidence: 0.88
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAINTFVAM WRFLLTLGPS AMIILLLNKG ILEQRPDIVD EQHRVRSIHI EDLRESYDFI  60
   61 VIGGGSAGCV LAARLSENPE WSVLLLEAGG DEPLLIDLPQ LYPVFQRSPW DWKYLTEPSD 120
  121 RYCLAMEDQR CFWPRAKVLG GCSSINAMMY IRGNRRDYDQ WAALGNPGWN YDNILHYFRK 180
  181 LEDMRVPGFE HSPYHGHGGP ISVERYRFPS PLLDIFMRAA QQLGMVHPDG DFNGRSQTGF 240
  241 APPHGSLRDG LRCSANKGYI RRSWQRPNLD IVLKAFVERI VIDPQSHRAI GVIFEYGLLK 300
  301 HTVRAKREVI LSAGSLASPQ LLMVSGVGPR DQLEPQGIPV VQHLPGVGGN LQDHISTSGA 360
  361 IYTFDSGQNR HLSFIVPEMM NEQAVEDFVQ GSDSFFYAMP VSEVMGFFST RYQDPRLDWP 420
  421 DVQIFMGSYG YGADGGMIGR RGAAITLDNY AEAFEPVLYQ DSFVIAPLLM RPRSRGYLQL 480
  481 RSADPKVHPL IHANYYDDPH DMAVMVEGLK LAHRLTQTPV MQSLNATMNI YEWRNCPEVE 540
  541 YLSDAFWECL ARFYSQTIYH PVGTCKMAPA SDPAGVVDPR LRVRGMRGLR VIDASIMPTI 600
  601 PTGNTNAPTL MLAERGADII KEDWRHYRDG GWG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle