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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG12539-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSTQISQLF LLLHLLIFTT VARGDVNRLV LDQLNQVGLV NLIEQATRPN VPRDLSNYDF  60
   61 IVIGAGAAGC TLAARLSENP QVSVALIEAG GVENIAHLTP VVAGYLQQTS SNWGYKSVPQ 120
  121 KLSCHGMNNN ECALPRGKIL GGTSSINYMI YNRGNRRDFD AWAAAGNPGW SYDEVLPYFL 180
  181 RSEHAQLQGL EQSPYHNHSG PLSVEYVRFR SQMVDAFVEA SVESGLPRTD YNGESQLGVS 240
  241 YVQANTLNGR RHSAYSAYIK PVRDLRSNLQ IFTFSQVTRI LIDEATKSAY GVEFHYKNKA 300
  301 YTFKARKEVI LSAGSFNSPQ LLMLSGIGPE DNLRGIGIPL IKALPVGKRM FDHMCHFGPT 360
  361 FVTNTTGQTT FTSRVTPAEL ISFLLAGNPA TRMSSIGGVE ALAFLKTQRS NLPNDWPDIE 420
  421 LIMVTGSLAS DEGTGLKLGA NFKDEIYDRM YRELAQAQQD HFTLLIMQFH PKSVGRLWLK 480
  481 DRNPLGWPKI DPKYFVAEED VEYLLDGIKA SLRIIEMPAM QRIGARLLKR TVPGCEGHQF 540
  541 ASDDYWRCSI RTLSYTLHHQ VATCRMGAES DPTTVVNHQL KVHGVRKLRV VDTSIIPFPP 600
  601 TAHTNAAAFM IGEKAADMIR TDWELI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle