YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG1662-PA, FBpp0...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSLRGCPAR GLILSRAIRG QRSLRMSWPR NSSATGGAGG AAPGGGSSTT TSTIGFGALQ  60
   61 KLREWHASAF SSRFLLFTNV GISLTLSCVG DVLEQHLEIY CGEIERFEST RTAHMAISGV 120
  121 TVGVICHYWY KMLDKRMPGR TMRVVAKKIV LDQLICSPIY ISAFFVTLGL LEQKTKHEVW 180
  181 EEIKEKAWKL YAAEWTVWPV AQFVNFYWIP THYRIFYDNI ISLGYDVLTS KVKHKQSHSH 240
  241 LKKIP

Type	Start	End	Confidence
Non-Cytoplasmic	1	35	0.50
Transmembrane Helix	36	57	0.53
Cytoplasmic	58	69	0.75
Transmembrane Helix	70	93	0.73
Non-Cytoplasmic	94	111	0.89
Transmembrane Helix	112	130	0.95
Cytoplasmic	131	148	0.89
Transmembrane Helix	149	171	0.77
Non-Cytoplasmic	172	245	0.69