YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|220945812, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYWRVTSSF LLARARPRLP QTLRPLSTMN ECRKNITNIT NITANNSILC AKSISKKHLF  60
   61 LEKRSMSDRS ENSKDVAKGQ DISNPMELTA EDRLAIEERQ NKAFAFFAET LQIYGVEELI 120
  121 FCFNGGKDCT VLLDLLMRYL RQENISSGDI PMLYIKSGDS FPEIDEFVER CVRNYRVQLV 180
  181 QYEGTLKEAL THMSSDMPRI KAVFVGSRNT DPYCQHLAPM QPTDNDWPPM MRLNPLLEWS 240
  241 YHDVWHYIHL NSVPYCSLYD RGYTSIGNRA NTVPNPHLRR TDAECECGSN SDAVCSCDLG 300
  301 GYRPAWELQD ATMERAGRLP RK

Type	Start	End	Confidence
Signal Peptide	1	15	0.55
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	322	0.99