YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Cpr11A-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSFLILLGF AALAAADVKH LTDRNLDLFK YNPSDIYTLP EDIDDDKPAV HFSGDVMKAK  60
   61 TETLQNYNSG KKFKLELKTQ NGIEVSSVGK LKDDKTFVVS GSYSFTGADG KRYKTRYTAD 120
  121 EFGYHPITEL DLDIPEPQPL ASAGQRQTVD PSSLLGNKNR FQFLQQTLDS DQGSQGPLRG 180
  181 SGQSGDDYSY TSPYGNGNAY GNGVGNGYGN GVGNGYGNGV GNGQGNGAGN AYGNGNGVGN 240
  241 GYGNGNGNGY DYQPPQVPLA TPSRLYLPTA

Type	Start	End	Confidence
Signal Peptide	1	16	0.98
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	270	0.99