YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	tsg-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLLCYFVIL FVGIAPWSSL ANDDGCNEVV CGSVVSKCLI TQSCQCKLND CHCCKDCLNC  60
   61 LGELYIECCG CLDMCPKHKD VLPSLTPRSE IGDIEGVPEL FDTLTAEDDE GWSTIRFSMR 120
  121 AGFKQRVQGG ASGDAGNGNG NGNAGSAGVT LCTVIYVNSC IRANKCRQQC ESMGASSYRW 180
  181 FHDGCCECVG ENCLNYGINE SRCRGCPEDQ DQLLTADTVP AEAEQDLERF FGNEEIEDEW 240
  241 GYGEEDEFS

Type	Start	End	Confidence
Signal Peptide	1	21	0.98
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	249	0.99