YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG10352-PA
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLTHSIWF SAIAMASLFH LYLHYIWSYV GLVPPGVVWY PLRDFIPGSA EALAHLAHLG  60
   61 KDVTFVTNNS ISSVKEHIEK FEKQGHLKID EHQIVHPAQT ICDHLRSIKF EGLIYCLATS 120
  121 PFKEILVNAG FRLAQENGSG IITRLKDLHE AIFSGESVDA VIIDVDFNLS AAKLMRAHFQ 180
  181 LQNPKCLFLA GAADALIPFG KGEIIGPGAF IDVVTQAVGR QPITLGKPGE DLRKLLLERH 240
  241 REIPPSRVLF VGDSLASDIG FARASGYQTL LVLTGGTKLE DVQRLPIDHS QMPDYLADCL 300
  301 GQIAINNNPA SSNSDSAHSV

Type	Start	End	Confidence
Cytoplasmic	1	7	0.63
Transmembrane Helix	8	27	0.62
Non-Cytoplasmic	28	320	0.83