YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0306531, p24...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.64
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTQIVVFAV ALMMHCISAV EFTFDLADNA VDCFYEEIKK NSSAYFEFQV SAGGQLDVDV  60
   61 TLKDPQGKVI YSLEKATFDS HQFVAETTGV YTACFGNQFS AFSHKIVYVD FQVGEEPALP 120
  121 GVDEHATVLT QMETSSQAIH KGLNDILDAQ THHRLREAQG RKRAEDLNQR VMVWSSLETA 180
  181 AVIVIGLVQI MVLRNFFTDR KPSQAHYGRL

Type	Start	End	Confidence
Signal Peptide	1	19	0.91
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	178	0.94
Transmembrane Helix	179	197	0.62
Cytoplasmic	198	210	0.64