YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0306086, Ant...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDEGGGGGH GKGDLKSFLM DFMMGGVSAA IAKTAVAPIE RVKLILQVQE VSKQIAADQR  60
   61 YKGIVDCFIR IPKEQGFSSF WRGNLANVIR YFPTQALNFA FKDVYKSVFL GGVDKHKQFW 120
  121 RHFAGNLASG GAAGATSLCF VYPLDFARTR LAADVGKGGN REFNGLIDCL MKVIKSDGPI 180
  181 GLYRGFIVSV QGIVIYRAAY FGFYDTCRDF LPNPKSTPFY VSWAIAQVVT TVAGIASYPF 240
  241 DTVRRRMMMQ SGLKKSEMVY KNTAHCWLVI AKQEGIGAFF KGALSNIIRG TGGALVLALY 300
  301 DEMKKYF

Type	Start	End	Confidence
Non-Cytoplasmic	1	17	0.47
Transmembrane Helix	18	37	0.50
Cytoplasmic	38	179	0.71
Transmembrane Helix	180	200	0.81
Non-Cytoplasmic	201	218	0.90
Transmembrane Helix	219	240	0.91
Cytoplasmic	241	307	0.83