YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Tango5-PB
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.29
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQETGSSATS LLAAGGKAKK NQKDKQRERE RLERGQLVLW RRPLQTTKYC GLELFTLLRT  60
   61 WSTRLLQQRL LLATLIVLSI VFSVIYKIDG PHQLAIEFVR RNTWFFVYWL GLGVLSSVGL 120
  121 GTGLHTFLLY LGPHIASVTL AAYECNSLRF PQPPYPDDII CPEEPYDKHV PNIWSIMSKV 180
  181 RLEAFLWGAG TALGELPPYF MAKAARLSGY DPEDAEELAE FEALNAKRHQ KNLSMMDRGK 240
  241 LFMERVVERV GFFGILACAS IPNPLFDLAG ITCGHFLVPF WTFFGATLIG KAVIKMHIQK 300
  301 IFVIIAFNET LIERAVDLLA TLPVLGHKLQ EPFKSFLKNQ KQRLHRQQRG AAGATTGAGD 360
  361 SGNLLSRIFE TFVIGMVCYF VVSIVNSLAQ SYHKRLHKKP ASPVAATTPT RQSTGASKKA 420
  421 GKQKALRD

Type	Start	End	Confidence
Cytoplasmic	1	68	0.85
Transmembrane Helix	69	88	0.92
Non-Cytoplasmic	89	105	0.80
Transmembrane Helix	106	129	0.90
Cytoplasmic	130	245	0.87
Transmembrane Helix	246	266	0.83
Non-Cytoplasmic	267	272	0.61
Transmembrane Helix	273	294	0.81
Cytoplasmic	295	309	0.71
Transmembrane Helix	310	324	0.29
Non-Cytoplasmic	325	367	0.44
Transmembrane Helix	368	389	0.71
Cytoplasmic	390	428	0.70