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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: alpha-Man-I-PK, ...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCPKTSKTTP LLLIGGICFV IVLVGITGIT LINNINLSNI IRLNEKVASD SVSNNENQIK  60
   61 ELNYVNNHPR NVYLKLNASS RDDEDDEQMQ KEQEQLELPK ISAVIGGSKP KVEDNQVKES 120
  121 SEVISPSTST FSMRSSAGEL TSTSAPLSSI VSVTAPPMPF GGVKYNQSSG LIDYEKRNQV 180
  181 VKMMEHAWHN YKLYAWGKNE LRPLSQRPHS ASIFGSYDLG ATIVDGLDTL YIMGLEKEYR 240
  241 EGRDWIERKF SLDNISAELS VFETNIRFVG GMLTLYAFTG DPLYKEKAQH VADKLLPAFQ 300
  301 TPTGIPYALV NTKTGVAKNY GWASGGSSIL SEFGTLHLEF AYLSDITGNP LYRERVQTIR 360
  361 QVLKEIEKPK GLYPNFLNPK TGKWGQLHMS LGALGDSYYE YLLKAWLQSG QTDEEAREMF 420
  421 DEAMLAILDK MVRTSPGGLT YVSDLKFDRL EHKMDHLACF SGGLFALGAA TRQNDYTDKY 480
  481 MEVGKGITNT CHESYIRAPT QLGPEAFRFS EAVEARALRS QEKYYILRPE TFESYFVLWR 540
  541 LTHDQKYRDW GWEAVLALEK HCRTAHGYCG LRNVYQQEPQ KDDVQQSFFL AETLKYLYLL 600
  601 FSDDSVLPLD EWVFNTEAHP LPIKGANAYY RQAPVTLPVS NAS

YRC Informatics Platform - Version 3.0
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