YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG42611-PB
Protein type:	Transmembrane
Type Confidence:	0.79
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPTPVGIGF GFGRKPPSKA RMRSRWRPPS ATTLLTHDPA NGDSHTAADP LQVTDAAPSG  60
   61 PPSSSSSSPI GDRHSQHHSS SAIDRRLQQQ QHHQSPQHHR QRGQLTTLAL LLLALVAISN 120
  121 LETLLAVRTE GPRNRHGSPG KYTQILTTTQ SSE

Type	Start	End	Confidence
Cytoplasmic	1	104	0.50
Transmembrane Helix	105	126	0.74
Non-Cytoplasmic	127	153	0.67