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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Ir8a-PA
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELPLLVLLL ALRFAGSEVL KITFWIEPVQ RAEFDTDIAM VLKELDALRL DVKVDDTTLT  60
   61 LTRSEDGLDM QRFCEILSTV GASAVIDLTY SHWEEGYNLV RSLGIGYVRL ERIMRPFLDM 120
  121 FGDFMRQKRA NNVAMVFMNA RDAVEAMQQM LVGYPFRTLI MDASQTDPGQ HFLERIRSLR 180
  181 PAPTYIALFA RAAAMNGIFE KVQKADLFQR PLEWHFVFLD TRDRVFKYRR QAELCTRFTL 240
  241 NPRAICRSMP MPDLYCGSGF TMQRAMLLNV LRSLINAAQV SPGYPLAIYQ DCNATASSSE 300
  301 VSDPLEKDDY NWLDMVHWSN FLAYAPPLPH IQDQFQSPVP GLTFAVNISA GYYSSEHEAK 360
  361 TDLAAWSSVG EMRLLNETIS PARRFFRIGT AESIPWSYLR REEGTGELIR DRSGLPIWEG 420
  421 YCIDFIIRLS QKLNFEFEIV APEVGHMGEL NELGEWDGVV GDLVRGETDF AIAALKMYSE 480
  481 REEVIDFLPP YYEQTGISIA IRKPVRRTSL FKFMTVLRLE VWLSIVAALV GTAIMIWFMD 540
  541 KYSPYSSRNN RQAYPYACRE FTLRESFWFA LTSFTPQGGG EAPKAISGRM LVAAYWLFVV 600
  601 LMLATFTANL AAFLTVERMQ TPVQSLEQLA RQSRINYTVV KDSDTHQYFV NMKFAEDTLY 660
  661 RMWKELALNA SKDFKKFRIW DYPIKEQYGH ILLAINSSQP VADAKEGFAN VDAHENADYA 720
  721 FIHDSAEIKY EITRNCNLTE VGEVFAEQPY AVAVQQGSHL GDELSYAILE LQKDRFFEEL 780
  781 KAKYWNQSNL PNCPLSEDQE GITLESLGGV FIATLFGLVL AMMTLGMEVL YYKKKQNALE 840
  841 ITQVRPVNDS SGSGGNSSTA PPTATSTTKQ AWHIPVLEAE EKPAKVSPPP SFETATFRGK 900
  901 KLPARITLGD GKFKPRHGLY ARRNLGASDS HSGYME

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle