YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Ppt1-PA, FBpp0311872
Protein type:	Transmembrane
Type Confidence:	0.69
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISICCSRFS CILFLLFLIF SLVLSYIWWS PTKGGTNPEV LPVVLWHGMG DTCCVPFSLG  60
   61 AIMNLIVEQT KGGYVRSLQI GGNVLIDWQS GFFIHPNEQV DYVCKQLLQD EHLAKGYHAI 120
  121 GFSQGGQFLR AVAERCPNPP MRNLITLGGQ HQGIFGLPMC PTLTEKPCDY ITRLLDNAAY 180
  181 APEVQKALVQ ATYWHDPIME NKYRLGSTFL ADINNELFIN KFYIENLQKL KKFVMVQFLN 240
  241 DTIVQPKESQ WFQYYTTGQN KVIQPFTESK VYQDLGLDKM HRQGQLVFLG VEGDHLAISK 300
  301 AWFIQNIVPL LLEK

Type	Start	End	Confidence
Cytoplasmic	1	8	0.63
Transmembrane Helix	9	29	0.65
Non-Cytoplasmic	30	46	0.88
Transmembrane Helix	47	67	0.56
Cytoplasmic	68	314	0.54