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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0310551, CG1...
Protein type: Transmembrane
Type Confidence: 0.77
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFAGAYAPNA GGVQQHTGGG YYGNGAAAGA GGSGNGAPRH ERQYYPRGNF GGAAGGAGIN  60
   61 GAATAAGSMH FGQPYGVMTY GIQNGLGMGA AGSGGGNPYR QQNGVAFAGN GLGGGAGGGS 120
  121 GGSGGYGGQR GKNPTYAQRY QKPNNGAGVA GGYQSNNYNA AALGMLSKEE RAEIQREKAK 180
  181 NPGRNLVKPK WENLEPFLKD FYNIHPNTLA KSEQQVAEIR RELEITVSGN ELPHPVVSFE 240
  241 ESSLPAHVIE EMKRQGFTKP TAIQSQGWPI ALSGRDLVGI AQTGSGKTLA YMLPAIVHIG 300
  301 NQPPIIRGEG PIALVLAPTR ELAQQIQSVV RDYGHLCKPE IRHTCIFGGS SKVPQARDLD 360
  361 RGVEVIIATP GRLIDFLENR NTNLQRCTYL VLDEADRMLD MGFEPQIRKI IEQIRPDRQV 420
  421 VMWSATWPKE VQALAGDFLN DYIQINIGSM NLSANHNIRQ IVEICTEIEK PQRLVCLLNE 480
  481 ISPIKNSGNN GNKIIVFVET KIKVEDILQI IRAEGYNATS IHGDKTQNER DSVLKDFRNG 540
  541 KSNILIATDV ASRGLDVEDL QYVINYDYPN SSENYVHRIG RTGRCQQLGT AYTFFTPDNA 600
  601 KQARELISVL EEAGQTPSQA LLDLARSMPS SGGYRGNKRW NNNSGGDRNT GGNNGIYQQR 660
  661 NNNPLNYQAG NNYNNNRSGP PTGSSYQQYA AGGNTYLQNG AGGGVNWNRM NQMGQDGGAG 720
  721 QQQRNGNTYR PRAPFNNGGP RAIMGHQGGG VGAGGAAGVG GGPQQLMAPQ QGGQYMPQAY 780
  781 RGRSQFVPQG AGAGGMPPRF QQYPKREYQQ QGVTHYGQQA LQHQQQQQQA GQQTKPPKDE 840
  841 SNKYVPSAAV TSSLVQYTPA NSPTIAAVAA AAAAAAGRAA AAAVAPAPGA AYMYDAAGVL 900
  901 TTAAAPGTNP YANQFSMPAT YYAAQHHQFA QAVAGPGPAP GQAIE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle