YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|220955826, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKLFALSIF HKGASEARLL KTASDLQSFS FFQRGTVNEF MTFASKTIVE RTQPALRQSV  60
   61 KQDAYMCHVY VRADNLAGVL IADHEYPHRV AHTLITKILD DFTAKVSADQ WPNGTEATIS 120
  121 FDLLPAFLAR YQNPVEADPL TKMQNDLDET KIILKNTIEA VLERGEKLDD MVSKSEKLSL 180
  181 QSKAFYKTAK KTNSCCSFT

Type	Start	End	Confidence
Signal Peptide	1	17	0.67
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	199	0.99