YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|220958524
Protein type:	Globular with Signal Peptide
Type Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQLCYLALS VLLAIIVVYG LLELHYFLRM CLCVLLARFV KRRCHILDTT TVNGLCLTND  60
   61 VDTLLYHMNN ARYFRELDFA RVDFYERTNL YRTITGMGGS VFQGAATIRY RRFIRPFHRF 120
  121 NIISRIIYWD EQSLFMEHRF VRPSDKFVHC IAICRQRVID VSMEAVMSEL LPRTSSNGFR 180
  181 ATVLTSLAAP SPAAGGISNP AMDTSLAENG HGTTSGGAAG TGATASATAA HCLKLKPSLP 240
  241 PELAKWIEYN DMSSKNLRSG C

Type	Start	End	Confidence
Signal Peptide	1	20	0.58
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	261	0.74