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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG3108-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYNARSRGSA ANEGISPKRI VTIGSLLLVL GLNQVASMSL DRLALERNEL PADQQQQQQQ  60
   61 DVLVDNMKLT SIPSADSSDM YMLVPDTVAS QLEDTEHVNR NSIEADPESD PSGSSSSDML 120
  121 MLESDSSPAM QLVELPSDIT VAESQPETEH DTENDQQQPE SIEEHVVLMK PASQEAQLEQ 180
  181 TVDLATEAAP VPLNDELPED EESPAATESA VEELEKESEA AMDDQVPEES EIQPEQVQPG 240
  241 EYQSESDGEQ AETKPEIEAQ PEVEAQPEAE AQPEAEPQLE VEPQPEVESQ PEVESQPEVE 300
  301 AQPEVEPQSE VESQPEAESH SEPETQAEVE AQPEVESLPE AESQPEAESQ PEREPEVEAE 360
  361 KISDNEVDTT EASLMETLVE GIEDGLTAAM DNLVPEELAE ASDKQETELE SEDQQSPVTE 420
  421 AIEEQAVPEI EQEKEKEPEQ ITLADETEQD SAQPSNEEPV EIAPEQHTEA EIAPAKIPEE 480
  481 GKPEEEVQVE EESKPVEESK PEEEIKQQED AKPEEDDQNY AETQPAVTEV KPEETPADIP 540
  541 VEIPAEVPAE IPAEIPAEVP AEIPAESPAE IAAEVPAEIP AEIPAEIPAE TPAETHAEIP 600
  601 ADVPAQVVAE APAETPAETP AEVPAEIPSK VQDEIQSDST QAEPQVEKEA QQPEKETKPL 660
  661 ESSLLTTIIP MVMPQPQVPS QPLQVQDSVL NYVNASFMQQ QPSETDLPKT EEESPFNAHL 720
  721 RRYDGAQVWR IVVQTDKDKR MADELQSKYD GQLWKEVKQE VDYLLKPQVL AAAERHIRAA 780
  781 NLSRIVLIDN LQRVIEKENP PAEKIAELQN RKGHRLTWQA YHRLEDIHGF IDYMAKTYPD 840
  841 ICSTEIIGYS VEKRPLKILK ISNGNARNPG IWIDGGMHAR EWISPATVTY IANQLVEGWE 900
  901 DLPEHMRSIN WYIHPVANPD GYEYSHTTDR LWRKNMRAHG RQCPGVDLNR NFGYKWGGKG 960
  961 TSASPCSQTY RGSKAFSEPE TFYISKFISG FPRETFQAYL SFHSYGQYIL YPWGYDYQLT1020
 1021 QDRADLDRVA RQAGTSITKS TGVKYTVGSS ATTLYPAAGG SDDWAKGIAG IKYAYTIEMG1080
 1081 DTGRYGFVLP ARFIQYNGKD GVTFADTVAR AIAQGRGKSV ARNSSGSRRR GH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle