YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0311140, FBp...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNYTDVLYQ YRLAPSASPE MEMELADPRQ MVRGFHLPTN ESQLEIPDYG NESLDYPNYQ  60
   61 QMVGGPCRME DNNISYWNLT CDSPLEYAMP LYGYCMPFLL IITIISNSLI VLVLSKKSMA 120
  121 TPTNFVLMGM AICDMLTVIF PAPGLWYMYT FGNHYKPLHP VSMCLAYSIF NEIMPAMCHT 180
  181 ISVWLTLALA VQRYIYVCHA PMARTWCTMP RVRRCTAYIA LLAFLHQLPR FFDRTYMPLV 240
  241 IEWNGSPTEV CHLETSMWVH DYIGVDLYYT SYYLFRVLFV HLLPCIILVT LNILLFAAMR 300
  301 QAQERRKLLF RENRKKECKK LRETNCTTLM LIVVVSVFLL AEIPIAVVTA MHIVSSLIIE 360
  361 FLDYGLANIC IMLTNFFLVF SYPINFGIYC GMSRQFRETF KEIFLGRLMA KKDSSTKYSI 420
  421 VNGARTCTNT NETVL

Type	Start	End	Confidence
Non-Cytoplasmic	1	92	0.94
Transmembrane Helix	93	114	0.90
Cytoplasmic	115	124	0.82
Transmembrane Helix	125	145	0.93
Non-Cytoplasmic	146	174	0.85
Transmembrane Helix	175	196	0.86
Cytoplasmic	197	211	0.91
Transmembrane Helix	212	230	0.88
Non-Cytoplasmic	231	276	0.95
Transmembrane Helix	277	298	0.94
Cytoplasmic	299	325	0.93
Transmembrane Helix	326	348	0.89
Non-Cytoplasmic	349	364	0.77
Transmembrane Helix	365	389	0.85
Cytoplasmic	390	435	0.97