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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62484202, gi|...
Protein type: Transmembrane
Type Confidence: 0.75
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTREREREC RLCAVTFFAK LHPGDVCGSN GLPLTPNSIA ILGRAQKLKE LQDEHLCQYL  60
   61 DVIRGKHERT IVVSEYLGLS LEDYAMRHPP LAIAQILRIF YQVACGINVL SRHHLVAHNV 120
  121 EPKHILLSSD GQRVKLFNYG LHHMTKGGAY VPFPIGNIRY MAPERLLGLN GNVKSDVWSL 180
  181 ALVMVELILQ IELWPKLKLS NVVRKILAFG KSNGALEKIA REHQCHERYV QMDQRLRQLL 240
  241 ESCLSVLPKR RPLPGELLEH PIFEEVLLDL KKQKMQPLSP ETEHLPLLLR CPLSQIYHLW 300
  301 QLAGGDVQAE LKKEGLIRSE APILGLPQIV RLSGASVCPG RSQAQLMDDR VVPLRLKALL 360
  361 QRLSGLPAAV YFPLLHSPRF PAHFARELQE LPLVIREKDI EYQFQRVRLF ARLLQGYPHT 420
  421 AEQLQREAAV DVPPLLRGPI WAALLEVVPN GSYAKIDKFT STSTDRQIEV DIPRCHQYDE 480
  481 LLSSPDGHRK LRRLLKAWVT AHPQYVYWQG LDSLTAPFLY LNFNNEELAF LSLFKFIPKY 540
  541 LQWFFLKDNS AVIKEYLSKF SQLTAFHEPL LAQHLASISF IPELFAIPWF LTMFSHVFPL 600
  601 HKILHLWDKL MLGDSSYPLF IGIAILRQLR STLLTSGFNE CILLFSDLPD IVMDGCVLES 660
  661 QKMYEATPKS ITHRQHALRL QPPQALDIGV ADVELKHLQQ EQCPRISAKD VQFLLDNSPA 720
  721 ELALIDLRSV VEFGRVHVPH SINIPFATVQ LGEQRLEALQ VPQLEAQLRG KIVVCVSNIH 780
  781 QHSVEVGHPL AQLKLLCKLK SFPISQFSHF LVACGVQRTC ILHKGFNVLH SIEPNILISN 840
  841 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle