YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24639776, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPENSAIQRC SFIFLTIENE DSALLHQQHT LASTKRNLAG LGIGAAGIGS SIYQQQQQQQ  60
   61 QQRTPHQQQQ QHQAVQGRHA DNDTMAAAAA AVAAQGTLAG SASAGGLNPF GQPASSGEFV 120
  121 YGLDGMDATD LEAGGMPQFA LSPDTYDVRQ RTIENIWDIT VSLNILYKEN WTKLAALEIA 180
  181 KFQDQLIKRL NEDVMLQLSH DDVANAPSSS SSSSSSSSSS SSSTGASGVP GSNNPATEAV 240
  241 LLHTHYHHHR AGGVGGVAVG GGPPHEWNFA KAFLYSLTVL TTIVPFMAVY KNGKKSWGDG 300
  301 DLWGHGGYGH DPYTF

Type	Start	End	Confidence
Cytoplasmic	1	36	0.73
Transmembrane Helix	37	53	0.67
Non-Cytoplasmic	54	315	0.91