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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG15570-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRLHLFLLL STCFLVPHDA KPTKRSPVGF SSTTLVSLLL ETETGNGTTD VPTTTETTTL  60
   61 RTQRVTNIGR LASKDLADLL LASMQARGAK LTSSQESTMK SLRTEEGKDT KGNNVFLQIG 120
  121 MDVIIDILIG ARDNATCGRI IQDIDQSQDR NTLTLTLKSF LALCVFNGIE CAKDEVSQVI 180
  181 KSTHFRQKQQ IKIVHDDNDH QQSEGSGLRT ARRVGVIKDD RNSVLKFLQA RNIKELSTIL 240
  241 NTLLKLCGAS GGEAHKIIRN LREMGPDNVS LLQVNAFSML SVSLLDSLST IAEGKISGLC 300
  301 SASPESWIVR LLAMGVDKVV LMGLMTALDR TIVNSSSAEM TNAAALNSIN GGDFSNSKSK 360
  361 VDQKTAAKRA ILDSGSGNDF NLAPSVEEIG NLNTVNDLIN ANVPVGANLP VLSTIDGSSS 420
  421 SGNTLNQSSD VVLDGDSNNF NRLVGAKIPV LANAPILSNI NGGSGSGGVG NNFNLAPSVQ 480
  481 EIGDSNTVND LINANVPVGA SLPVLSSIDG SGFSGNTLNQ GTDVLVNGTG NTFNRLVGAR 540
  541 IPVLANAPIL SSINSGSSGT SGSSSSGSSS SGSSSSSSGS SSGVGNNFNL APSVQEIGDS 600
  601 NTVNDLINAN VPVGASLPVL SSITGSGFTG NTLNQGSDVL INGTGNTFTR LVGARIPVLA 660
  661 NAPILSSINS GSSSTSSGSS SSGSSTSSGS SGSSTSGSSG SGSTSSSSGT PSSSGSSVLG 720
  721 NNVNVKGDTI TGNKNFLFKL LDLGLPISLA APVLSIINQG SSTGSSTGSS TSSSTGSSTG 780
  781 TSSGSSTGSS SGSSGVTSTG SSNSTSSGAS VGNNANIDPS VDIVGNNNQV TKVVDANVDA 840
  841 LANVPVLSKI TGTGFANNLN QKSNVLIRGD NNTVTKVVDA NVPVLAAVSA LSSITGKSSG 900
  901 SGSSSGSSGS GSSSGSSGSG SSSGSSGSGS SSSGLLSGLT GSSGSSSDGL LGGVLGGVVP 960
  961 VVGEVVGDVV QAVGPVLGGV LNTVEPVLGG VLNTVEPVLG GVLNTVEPVL GGVLNTVEPV1020
 1021 LGGVLNTVEP VVGDLVGGVL SGVTGSSSSS SSSLSGVTNL LGGSSSSNGS SSIIGNSASS1080
 1081 GANTLITGNN NNIVRLVDVN GLVLADIPIL SSITNLLGVT GLIGNSANKG PKTVVIGDNN1140
 1141 RIVKLINVDL WVLAFLDVLN IVRGSGGVCN QLNSGPNTEI IGNNNDVVQL VDVDLSVLLV1200
 1201 VDLLSHLITN VANDCSGKTT TVAPTQSPTE SPTESPTGSP TDSPTQSPTE TPTYGPPTNE1260
 1261 PPTNQPPTNQ PPTVQPPTNQ PPTNQPPTNQ PPTNQPPTNQ PPTNQPPTNQ PPTNEPPTNR1320
 1321 PPSPSPNNCY RRYCRKWRTR PSYLCYKNCG GAFVYKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle