YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Vap-33-1-PC, FBp...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKSLFDLPL TIEPEHELRF VGPFTRPVVT IMTLRNNSAL PLVFKIKTTA PKRYCVRPNI  60
   61 GKIIPFRSTQ VEICLQPFVY DQQEKNKHKF MVQSVLAPMD ADLSDLNKLW KDLEPEQLMD 120
  121 AKLKCVFEMP TAEANAENTS GGGAVGGGTG AAGGGSAGAN TSSASAEALE SKPKLSSEDK 180
  181 FKPSNLLETS ESLDLLSGEI KALRECNIEL RRENLHLKDQ ITRFRSSPAV KQVNEPYAPV 240
  241 LAEKQIPVFY IAVAIAAAIV SLLLGKFFL

Type	Start	End	Confidence
Non-Cytoplasmic	1	245	0.54
Transmembrane Helix	246	268	0.87
Cytoplasmic	269	269	0.52