YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0309179
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Non-Cytoplasmic	1	73	0.54
Transmembrane Helix	74	94	0.90
Cytoplasmic	95	103	0.62
Transmembrane Helix	104	125	0.91
Non-Cytoplasmic	126	131	0.67
Transmembrane Helix	132	153	0.89
Cytoplasmic	154	172	0.72
Transmembrane Helix	173	194	0.89
Non-Cytoplasmic	195	206	0.79
Transmembrane Helix	207	228	0.91
Cytoplasmic	229	287	0.90
Transmembrane Helix	288	304	0.82
Non-Cytoplasmic	305	333	0.81
Transmembrane Helix	334	356	0.82
Cytoplasmic	357	366	0.71
Transmembrane Helix	367	384	0.90
Non-Cytoplasmic	385	599	0.83
Transmembrane Helix	600	619	0.71
Cytoplasmic	620	629	0.79
Transmembrane Helix	630	651	0.89
Non-Cytoplasmic	652	660	0.69
Transmembrane Helix	661	679	0.95
Cytoplasmic	680	743	0.88

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASEITNGKN GQNGKNGQKE ESDSQIAPPI PYPKSVAFII SNEFCERFNY YGMRTILVLY  60
   61 LTNKLGYNEE TATVLFHTFT MLVYIFPLIG ALIADGWLGK YKTILYLSLV YSLGAMVVSF 120
  121 GAVPLSGMPT KAVTVVGLLL IAIGTGGIKP CVSAFGGDQF SLPAQSFQLA KFFSLFYFAI 180
  181 NAGSLISTTF TPILRADVHC FGDQDCFSLA FGVPAILMIF SVIIFMAGKR LYRCQPPAGN 240
  241 MIFGVSRCIA DAFKGWQKRR HSEPMESFLD YAKPTVGSRM VQETKCLGRI LRLFLPFPVF 300
  301 WALFDQQGSR WTFQATRMDG NVLGFQIKPD QMQVVNPLLI LGFLPLFDYI IYPALARCGI 360
  361 RRPLQKLTLG LLLAALGFFL SAGLEMKMEQ AAYRATPIEP DMTHLRIYNG MPCRYEISSA 420
  421 VVQTPRVIEP LNVWEDLSLQ MTESKEYTFN AQPVSGECPS IIDKLRLQPG KSVSYFLAQD 480
  481 KLVEFADGLQ MAATDTGRTS VRALLNTPDG EGPVLLSTES ATSQEPPLTL DKGNVPQLHR 540
  541 ITPGFARVDI NGKKVASFEA KEGRLYSILV TGSARDGYQH NVIEVVALST VSILWQLPQI 600
  601 VVMTAAEVMF SVTGLEFSYS QSPPSMKSVL QACWLLSVAI GNMLVVVIAE FKFTSSQSGE 660
  661 FTLFASLMLV DMMIFLWLAR SYQYKDQRED FEDDDDATID SVMQSKPKAT TVDTTARKTN 720
  721 GIEAEPGYGA YRNHAYDNDF SEA