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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3449110, gi|2...
Protein type: Globular with Signal Peptide
Type Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKFRYKRKE PTNVVGVAAP TAGAAALGSG ASSTPGTSPT SPVSVPVPVQ AHHPHPQLGH  60
   61 LISNNGGTLP RSSPRKLILD GADKSATLTR QQSKQKSVSA LAKVASSVEL AVMGYNSTGN 120
  121 GNSNGHINSA GNSERDRCIN AVIQLQTSSE PALCPEPLRR ALASGPLAGR RFPLGCLGDA 180
  181 AECFELLLHR VHSHISPDDG DSCESSACIA HRRFAMRVIE QSVCKCGANS EQLPFTQMVH 240
  241 YVSASALTSQ KSLALQSHQQ LSFGQLLRAA GNMGDIRDCP NTCGAKIGIC RALLNRPEVV 300
  301 SIGIVWDSER PAADQVHAVL KAVGTSLRLG DVFHQVSEPR WAQQTQHELV GIVSYYGKHY 360
  361 TTFFFHTKLK VWVYFDDANV KEVGPSWEGV VDKCSRGRYQ PLLLLYAVPQ QPTVGNGVGI 420
  421 GHVDVAMPAS APSIAGSVVR RAVTPSPEKP SLGNTRRAIT PTPLRTPPND YQNLSVIQKN 480
  481 IFPSNLAMGT DETDAYISRK TVEHVLSAQY QNLSVIQDKI GGGNGVGVGQ QSVDKDGGFL 540
  541 SRKPIEAVLS AQLARRQHLQ LQRSHSAESS SGHASSNGSS PPSDGLTMPE HLNQPRRRDS 600
  601 GNWSGDRNSA SSASSTTLDN PYLYMVAKRG VAAVPQSPTR HGLPYDPGYD SFSLSSTDSY 660
  661 PPKHALNPQL AKIPEAAMGV VPNGGAMPHG HGNGQLALSG DCEKLCHEAD QLLEKSRLVE 720
  721 ESHDLETALV LCNAAAGRAR AAMDAPYSNP HTMTFARMKH NTCVMRARSL HRRILVEKGA 780
  781 ETEAMPELKH MREGSTSSVK HVRQNSKDRT LEKEQQQLQF QQIQQIQQIH QIQQQIPASI 840
  841 EIYATLPKRK SPLKALASAS ACDDNAIEYE QEKQLATSPG KPERESRSLF GRKDKEKEKR 900
  901 SRSEDRNKLT REFSLTETLL VNAKDTLKKH KEDKDEKKEK DKSGKKQHKI RRKLLMGGLI 960
  961 RRKNRSMPDL TEAVDDSTAN AGITHHPHYP AQGVTTAGTL LGTSVDDSAV GLGKHGHGMS1020
 1021 GYISEGHFDY SGSGSASNSG AGSNPNPNLE RSKLMRKSFH GSGRQLTMVP KVAPPPPMRT1080
 1081 SSTLTPQQQQ QQQQQFHHEA NLSNLSAMSS NTSISEDSCQ TIITTCAQVH SEQSPLKDLQ1140
 1141 MLVAQDELPL PPPMELPPYP SPPHSSCHSR QASEDFPPPP PPELDLEPLN QQLSQLQALE1200
 1201 AASKQQRQQL ESLEGTTSIL AQLQQRQHLL KLRKEQANHP GAATTDATWL KELQAKQAND1260
 1261 LRAMQRKLEA SSPSSVRDLT HRFEQTSIRS YASQELLSQP GQSQQLGQLR TQMNGLPNGN1320
 1321 AKMDVDEVDA MPAVRNSLPA ALSAHQLLPK PKYEMTQSQI AEEIREVELL NTMVQQTLNQ1380
 1381 NGAAALPKRV KKKSVSFCDQ VILVATAGNE EDDDFIPNPI LERVLRTAQH PNEKVTAQMI1440
 1441 QQQQQNMMRL QTEAQPRQQQ VQQLQQPSPM LGRPAGATAD MQRYVQRMQQ QQQQQQQQQQ1500
 1501 QQQQQQQQQQ QQQQQQQQQQ QQHQELYRQQ QLHRTSMSGI ASQQHLQQLD AQYTTMPRPL1560
 1561 HHSQLGSYSV TLQKHQQLQQ QQQQQQQQQA PQQLSLGYFS NGSVATSEQV PLPSPYQRVP1620
 1621 LPHGYQPAAA GPYYPLPNAQ QHLQQQQLMA KPVQKKVSFE PGTKGEADCL PPPPPPPQKN1680
 1681 GLPETGSAGS GHPGAAPGAS GAGGTTSAGI TAIPTRVYNN AIVKASAKAV ECNLCRKRHV1740
 1741 IAPAVYCTNC EYYLQMLNQR R

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