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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|22831636, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNSVTPASN TTSLPTSTPS VTTSPPASTD FMLLAAAATS ATSATPATAT SAAATAASNP  60
   61 AKRKLSSIAE IPSKFLVVSD AKGVYSAHTH PNGFAADSLG VDNNETMIKK LMQNLQSQRQ 120
  121 QQSLQQLRSL RPAEISLTPP PAATRKVDIS NSRTRSYSLS NVSAARDQQD HPQHQQHANH 180
  181 MQIQQHYGYM RSNIGGVIYG LHKDSADSAA SSACGAGAGA AAVGMSIASS APAAGSQLSA 240
  241 HHHTGHGGRR RTTSSNSNGA GTREVHNKLE KERRAQLKEC YDLLKKVLPM GDEDRKKTSN 300
  301 LTILDTAHKY VNSLSHEVCE QEAKIEKLAK QKIELQKRLK QLSLRRESPP TDQQIIPQAD 360
  361 KVCLATTATT APPTAASGHN GTTILFDAGN ACATGQLTTV INKTNGGATA AASSKHNGNH 420
  421 TGGATTTLTP AMGIMTIKNG NGSNGNMLAI SPTGGHNHQL HQHHNGSPAG SPSGIGATTG 480
  481 ATITRGSPTP STPSPSPSSS SSGVSLSTSF MGGSSSSSSS SSSSSSSSSS SSSSSPTQQQ 540
  541 QIITPTATAR SVGLKFHGGA GAAVPAGGGS VNGFHQADKD RNYTFLRLSA GTTAQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle