YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: dnc-PN
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIATLFIIFA FIRAFPWSRK RGRPALALTL MPEGGEDHRG DLNQKGENNN RPRPSISLAN  60
   61 NGEAMAPRTR RKSSKFHEVT FSGSVGGGDS DGGGEAINGG NLDVSPSKRH SLSTTTSNSS 120
  121 SAPYRYLSGS SRSRGSRGDC HEYYQLQQHS SSLSNGNRGN RGLSQRSDTM ATEAEGEEFD 180
  181 VDPMDEDDED QTYDRETEEF YSNIQDAAGT GSSSRSKRSS LFSRSDSSAT TTSSSGGGTF 240
  241 TGGKRRSAAS ILSSSMCSDL MTSDRRSSTA TEYSVKSVTT GNTSQRRSSG RIRRYVSRMT 300
  301 IAGARRRTTG SFDVENGQGA RSPLEGGSPS AGLVLQNLPQ RRESFLYRSD SDFEMSPKSM 360
  361 SRNSSIASES HGEDLIVTPF AQILASLRSV RNNLLSLTNV PASNKSRRPN QSSSASRSGN 420
  421 PPGAPLSQGE EAYTRLATDT IEELDWCLDQ LETIQTHRSV SDMASLKFKR MLNKELSHFS 480
  481 ESSRSGNQIS EYICSTFLDK QQEFDLPSLR VEDNPELVAA NAAAGQQSAG QYARSRSPRG 540
  541 PPMSQISGVK RPLSHTNSFT GERLPTFGVE TPRENELGTL LGELDTWGIQ IFSIGEFSVN 600
  601 RPLTCVAYTI FQSRELLTSL MIPPKTFLNF MSTLEDHYVK DNPFHNSLHA ADVTQSTNVL 660
  661 LNTPALEGVF TPLEVGGALF AACIHDVDHP GLTNQFLVNS SSELALMYND ESVLENHHLA 720
  721 VAFKLLQNQG CDIFCNMQKK QRQTLRKMVI DIVLSTDMSK HMSLLADLKT MVETKKVAGS 780
  781 GVLLLDNYTD RIQVLENLVH CADLSNPTKP LPLYKRWVAL LMEEFFLQGD KERESGMDIS 840
  841 PMCDRHNATI EKSQVGFIDY IVHPLWETWA DLVHPDAQDI LDTLEENRDY YQSMIPPSPP 900
  901 PSGVDENPQE DRIRFQVTLE ESDQENLAEL EEGDESGGES TTTGTTGTTA ASALSGAGGG 960
  961 GGGGGGMAPR TGGCQNQPQH GGM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle