YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Csat-PA, FBpp0311754
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSIHMNANT LKYISLLTLT LQNAILGLSM RYARTRPGDI FLSSTAVLMA EFAKLITCLF  60
   61 LVFNEEGKDA QKFVRSLHKT IIANPMDTLK VCVPSLVYIV QNNLLYVSAS HLDAATYQVT 120
  121 YQLKILTTAM FAVVILRRKL LNTQWGALLL LVMGIVLVQL AQTEGPTSGS AGGAAAAATA 180
  181 ASSGGAPEQN RMLGLWAALG ACFLSGFAGI YFEKILKGAE ISVWMRNVQL SLLSIPFGLL 240
  241 TCFVNDGSRI FDQGFFKGYD LFVWYLVLLQ AGGGLIVAVV VKYADNILKG FATSLAIIIS 300
  301 CVASIYIFDF NLTLQFSFGA GLVIASIFLY GYDPARSAPK PTMHGPGGDE EKLLPRV

Type	Start	End	Confidence
Cytoplasmic	1	12	0.68
Transmembrane Helix	13	33	0.72
Non-Cytoplasmic	34	39	0.57
Transmembrane Helix	40	63	0.64
Cytoplasmic	64	140	0.74
Transmembrane Helix	141	163	0.86
Non-Cytoplasmic	164	191	0.95
Transmembrane Helix	192	212	0.94
Cytoplasmic	213	222	0.88
Transmembrane Helix	223	244	0.84
Non-Cytoplasmic	245	260	0.86
Transmembrane Helix	261	281	0.95
Cytoplasmic	282	289	0.73
Transmembrane Helix	290	308	0.96
Non-Cytoplasmic	309	313	0.80
Transmembrane Helix	314	332	0.92
Cytoplasmic	333	357	0.92