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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|220955280, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFQQLLHVR RLASAGATTL MRRPITTTTI TTTSRTALAA TYPAFATTVR TMAGSGAPIP  60
   61 ELTEITDNVQ RGNYATLTDK DVAHFEQLLG KNFVLTEDLE GYNICFLKRI RGNSKLVLKP 120
  121 GSTAEVAAIL KYCNERRLAV VPQGGNTGLV GGSVPICDEI VLSLARLNKV LSVDEVTGIA 180
  181 VVEAGCILEN FDQRAREVGL TVPLDLGAKA SCHIGGNVST NAGGVRVVRY GNLHGSVLGV 240
  241 EAVLATGQVL DLMSNFKKDN TGYHMKHLFI GSEGTLGVVT KLSMLCPHSS RAVNVAFIGL 300
  301 NSFDDVLKTF VSAKRNLGEI LSSCELIDER ALNTALEQFK FLNSPISGFP FYMLIETSGS 360
  361 NGDHDEEKIN QFIGDGMERG EIQDGTVTGD PGKVQEIWKI REMVPLGLIE KSFCFKYDIS 420
  421 LPLRDFYNIV DVMRERCGPL ATVVCGYGHL GDSNLHLNVS CEEFNGEIYK RVEPFVYEYT 480
  481 SKLKGSISAE HGIGFLKKDY LHYSKDPVAI GYMREMKKLL DPNSILNPYK VLN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle