YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0303433, a6-...
Protein type:	Transmembrane
Type Confidence:	0.66
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQKHSEPFY ISPRLFDNRR LKRRRCRWME RLLEHQRICM ARMRDQVALA SKTDRQLSHL  60
   61 QRRHVASTLQ PDVTIDLLSD DDETPSAGQP AAAGHNRLLI PAPGHRAHRT GRRQAPRRAA 120
  121 THSYPVTDSI LITSDDEHNE QEPSSTARVR SQLSMRSPPP LAPLTQSETI EEVTVSLVPR 180
  181 TSTTANCLTR VSGHPKPCRA STAASNGFAT AEGGEGGNET GCFLEVDVGG GITATLPDET 240
  241 TVHTVIANRI YELSLSKLRE GLAFSGVPEY TNDLMPEQLQ KLSPALRAKV APLVAPSPPT 300
  301 PISLKLSSDL SISLISDEDD CESTGPHVNG GVGTEPVHPV VVAAAEAHAA AKLLKQQQPQ 360
  361 LSVVQHLQYV GGGLAAPVAL ALPVMAANPT SSASVVALPL QLPRRRKLG

Type	Start	End	Confidence
Non-Cytoplasmic	1	368	0.96
Transmembrane Helix	369	390	0.57
Cytoplasmic	391	409	0.49