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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7512003, gi|3...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCPDRPILST LCKEFLRVNV SAILYMMNNE QFGHSTASAQ YFLQLAGYLG IPVISWNADN  60
   61 SGLERRASQS TLQLQLAPSI EHQSAAMLSI LERYKWHQFS VVTSQIAGHD DFVQAVRERV 120
  121 AEMQEHFKFT ILNSIVVTRT SDLMELVNSE ARVMLLYATQ TEAITILRAA EEMKLTGENY 180
  181 VWVVSQSVIE KKDAHSQFPV GMLGVHFDTS SAALMNEISN AIKIYSYGVE AYLTDPANRD 240
  241 RRLTTQSLSC EDEGRGRWDN GEIFFKYLRN VSIEGDLNKP NIEFTADGDL RSAELKIMNL 300
  301 RPSANNKNLV WEEGVPEKFH LKITFLEEAP YINLSPADPV SGKCLMDRGV LCRVAADHEM 360
  361 AADIDVGQAH RNESFYQCCS GFCIDLLEKF AEELGFTYEL VRVEDGKWGT LENGKWNGLI 420
  421 ADLVNRKTDM VLTSLMINTE REAVVDFSEP FMETGIAIVV AKRTGIISPT AFLEPFDTAS 480
  481 WMLVGIVAIQ AATFMIFLFE WLSPSGYDMK LYLQNTNVTP YRFSLFRTYW LVWAVLFQAA 540
  541 VHVDSPRGFT SRFMTNVWAL FAVVFLAIYT ANLAAFMITR EEFHEFSGLN DSRLVHPFSH 600
  601 KPSFKFGTIP YSHTDSTIHK YFNVMHNYMR QYNKTSVADG VAAVLNGNLD SFIYDGTVLD 660
  661 YLVAQDEDCR LMTVGSWYAM TGYGLAFSRN SKYVQMFNKR LLEFRANGDL ERLRRYWMTG 720
  721 TCRPGKQEHK SSDPLALEQF LSAFLLLMAG ILLAALLLLL EHVYFKYIRK RLAKKDGGHC 780
  781 CALISLSMGK SLTFRGAVFE ATEILKKHRC NDPICDTHLW KVKHELDMSR LRVRQLEKVM 840
  841 DKHGIKAPQL RLASSSDLLN HHHLKERPPL LGNLSLAASA QDLYRCCPSS CNPLPTGAAI 900
  901 NGSGFPASSS EKLAASIPII VSISIGIAKL RTPPPVPPPQ VPMVRQSVNH SASVPLPGNT 960
  961 SPVLCGAGQH LYLCCSTTCQ PSSEPGAHCL GRLCGALLWG GCHSKGPADC GL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle