YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG14778-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGPLLWQNF KVFVTRYPIM RGMISYSLIW PTGSLIQQTV EGRRWGTYDW WRVLRFSMYG  60
   61 GLFVAPTLYG WVKISSAMWP QTSLRTGVIK AAVETISYTP GAMTCFYFIM SLLESKTVEQ 120
  121 AVAEVGKKFL PTYKVALSVW PLVATINFTL IPERNRVPFI SACSLCWTCF LAYMKHLEHH 180
  181 EVDGAI

Type	Start	End	Confidence
Cytoplasmic	1	16	0.64
Transmembrane Helix	17	36	0.67
Non-Cytoplasmic	37	52	0.42
Transmembrane Helix	53	75	0.84
Cytoplasmic	76	90	0.43
Transmembrane Helix	91	111	0.67
Non-Cytoplasmic	112	129	0.40
Transmembrane Helix	130	151	0.59
Cytoplasmic	152	156	0.46
Transmembrane Helix	157	177	0.55
Non-Cytoplasmic	178	186	0.49