YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0308652, CG1...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.40
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVPAAVKLLQ ASLGQWRRGS KLHPMAKGAL TYAVMWPAGS LIQQAMEGRK LREYDWARAL  60
   61 RFSLFGALYV APTLYGWVRL TSAMWPQTNL RTGIVKAITE QLSYGPFACV SFFMGMSLLE 120
  121 LKTFSQAVEE TKEKAAPTYK VGVCIWPILQ TINFSLVPEH NRVVFVSICS LMWTIFLAYM 180
  181 KTHHEEQSNS AVLPCT

Type	Start	End	Confidence
Cytoplasmic	1	58	0.69
Transmembrane Helix	59	78	0.92
Non-Cytoplasmic	79	101	0.71
Transmembrane Helix	102	121	0.75
Cytoplasmic	122	137	0.65
Transmembrane Helix	138	154	0.40
Non-Cytoplasmic	155	162	0.46
Transmembrane Helix	163	180	0.83
Cytoplasmic	181	196	0.62