YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG14630-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSCRQLISR LSLLRQASTF ACVRLCPDYV EVQEEQGNLL KYPQVWLRDN CQCAECFHAA  60
   61 TRARKSHWDR GPLNIPVSQV AYNKERKQLE IIWQDKHRST FDLGWLRERD FGETGRKHYL 120
  121 EEVYKPPAQL WGKTEFEDVK REFQYEDVLE QDAALRVWLE ALAVQGFAIL KGAPNDINVA 180
  181 KKLAERIGYI KRTTYGDVFE VKSKPNARNY AYLMTPLPLH TDMPYYEYKA GINILHTLVQ 240
  241 SESKGGANTL TDGFNVASQL QKLHPEDFEV LKSVPVNWFD IGHDGDDSKP FHSLWRAPVI 300
  301 CLDVDGRFAR INQNTTKRDS RFSVSLAQAV SWYKAYDKFL EIAQSEAVEF KTQAGDVFVF 360
  361 NNLRMLHGRT AYEDAPGNKR HLVGAYVDWD IIYSKLRTLK FPNAKD

Type	Start	End	Confidence
Signal Peptide	1	21	0.71
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	406	0.99