YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Sec22-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLTMIARV IDGLPLVGTM QDDEQSGRSI LDYQNQAKML FRKLGTHSPA RCSIETGPYL  60
   61 FHYLIENDVC YLVMVDKMYS KRLAFNYLED LAQEFHANYG RRVNSVTRPY AFIEFDVYIQ 120
  121 KAKKQLTDRR RNISNINTQL QDVQRIMVQN IDDVLQRGTV LAELDTKTQN LSMMSQKYKK 180
  181 DAKLLNRKSM YVKAMALGMI LLVFIMYFWV L

Type	Start	End	Confidence
Cytoplasmic	1	188	0.98
Transmembrane Helix	189	210	0.92
Non-Cytoplasmic	211	211	0.99