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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28571080, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFFCLALII GCAVGEYSEV RVIQEEDNFL ESPHYLKNEE IGDLFSQLAK DYPDLAQTYT  60
   61 IGKSLEDRPI YALALSAPTG ESKNGDLLRP MVKLVANIQG DEAVGRQMVL YMAEYLATHY 120
  121 DGDPKVQALL NLTEIHFLPT CNPDGFAKAK VSHLLFLAYQ ESTESKFWNG KMIEGNCESL 180
  181 PNYVGRGNAA NIDLNRDFPD RLEQSHVHQL RAQSRQPETA ALVNWIVSKP FVLSANFHGG 240
  241 AVVASYPYDN SLAHNECCEE SLTPDDRVFK QLAHTYSDNH PIMRKGNNCN DSFSGGITNG 300
  301 AHWYELSGGM QDFNYAFSNC FELTIELSCC KYPAASTLPQ EWQRNKASLL QLLRQAHIGI 360
  361 KGLVTDASGF PIADANVYVA GLEEKPMRTS KRGEYWRLLT PGLYSVHASA FGYQTSAPQQ 420
  421 VRVTNDNQEA LRLDFKLAPV ETNFDGNFRK VKVERSEPPQ KLKKQFNGFL TPTKYEHHNF 480
  481 TAMESYLRAI SSSYPSLTRL YSIGKSVQGR DLWVLEIFAT PGSHVPGVPE FKYVANMHGN 540
  541 EVVGKELLLI LTKYMLERYG NDDRITKLVN GTRMHFLYSM NPDGYEISIE GDRTGGVGRA 600
  601 NAHGIDLNRN FPDQYGTDRF NKVTEPEVAA VMNWTLSLPF VLSANLHGGS LVANYPFDDN 660
  661 ENDFNDPFMR LRNSSINGRK PNPTEDNALF KHLAGIYSNA HPTMYLGQPC ELFQNEFFPD 720
  721 GITNGAQWYS VTGGMQDWNY VRAGCLELTI EMGCDKFPKA AELSRYWEDH REPLLQFIEQ 780
  781 VHCGIHGFVH STIGTPIAGA VVRLDGANHS TYSQVFGDYW KLALPGRHNL TVLGDNYAPL 840
  841 RMEVEVPDVH PFEMRMDITL MPDDPQHWAS ANDFRIIENV VNTRYHTNPQ VRARLAELEN 900
  901 QNGQIASFGY ADSEFGTIFN YLKMTSDIGE PEEHKYKLLV VSSLYDTTAP LGREILLNLI 960
  961 RHLVEGFKLQ DTSVVELLKR SVIYFLPQTS KFQNVFDMYN SNTSICDPVL GDELAERILG1020
 1021 PETDQAKDVF LQFLRSERFD LMLTFGAGNS DLNYPKGDSV LVKFAHRMQR TEFNYSPLQC1080
 1081 PPSATRQLHR ETTERLTNMM YRIYNLPVYT LGISCCRMPH QKKIASVWRK NIDKIKNFLA1140
 1141 LVKTGVSGLV QNDKGQPLRE AYVRLLEHDR IINVTKNVAR FQLMLPHGLY GLEVTAPNYE1200
 1201 SQMIKVDVED GRVTELGIIR MHPFTLIRGV VLELPNNDNR ATTSIAGVVL DESNHPVRNA1260
 1261 KVSVVGQTQL RNFTGSMGQY RISAVPLGTI TLKVEAPRHL EATRQMHLIQ GGLATENVVF1320
 1321 HLKVNEHVFG LPRFLFILCA SVLIIVGVIV CVLCAQFWFY RRHRGDKPYY NFSLLPQRGK1380
 1381 EQFGLEDDDG GDDGETELFR SPIKRELSQR AHLVNNQTNY SFIIQAA

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Created and Maintained by: Michael Riffle