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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG3156-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLNCTRLTH LCTTLRVRKS SQIRLSTSYN HHLGRCLHHR TARSLQHSLP PPNRYHSHLH  60
   61 PTLRMPWWCM RRGFAQSSKW LARNAKANLP TAVGAGIVPA PVKMGRSQYG RLLSLTKSEK 120
  121 WVLTAGIGCL VVSSAITMSV PLFLGKVIDV VFNKSGMDSA AMAKLGEYSV LLFGIFVLGG 180
  181 FANFARVHLF GNAALRIVRS LRSRLYRSML MQEVGWFDTK GTGELINRLS NDTLMVGTSL 240
  241 SQNVSDGLRS VAMIGVGTGM MIYTSPQLAA VSALVVPAMA GMAIVYGRYV RRITKVELDK 300
  301 YAEIMKFAEE RFGNVKTVKT FCREQQEVAA FDGKLDEALQ IGYKETRARA IFFGLTGFCG 360
  361 NFIIISVLYY GGTLVLQDSL TIGALTAFML YAGYVAISMN GLSNFYSQLN KGIGASERIW 420
  421 EILDRECSIP IDKGVVPLEK PVGEVGFQNV FFTFPTRPES AVLTDFSLNL MPGTTTAVVG 480
  481 RSGSGKTTIA LLMLRLYDPQ GGTVHLDGID LRTVNPQWLR NNIGAVSQEP VLFSCSIREN 540
  541 ILYGANPGET PSPERLQQVI EDANVSQFTD QLPDGLDTLV GQRGMMLSGG QKQRVAIARA 600
  601 LIKNPAILIL DEATSALDAV SENLVQNALD NLIQGRTVLT IAHRLSTIRN ADQIAVLSDG 660
  661 KIVEQGSYNE LMGIQEGVFR ELVASQAFGS RN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle