YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG13377-PA, FBpp...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAMTMLVLG FQLLALFSIA GALLIYLICK VREDSASANA DSHPSRVVLI TSADTALGLQ  60
   61 LCTHLANKGY RVFAGMKEAQ DSLPAKLLCG WMKIREYSEE PIAGTIIPMR LDVTREDVLR 120
  121 EATVIIGANL NADERGIAAV INTSGSVFRG QVESQNVQQW EHMLRTNILG TLRVAKAFVC 180
  181 FLRPTRGRLL YLGGVSGGGN ARNEGDGLVA FNASRVAVDK CAEELRKELH PYGVSVVALD 240
  241 TCGMTAESLY KAPVAQTMSL VVGAPTQYTA DVLSPDALHV IERALWDYVP QQRYALLSHN 300
  301 KYQFALPCRS SLRLQRPVAS TVGESASQSV

Type	Start	End	Confidence
Signal Peptide	1	22	0.67
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	330	0.89