YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG3038-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRMRGRRLLP IILSLLLIVL LSLCYFSNHL RDSSQSRKNG FLLHLPLETK RNPSNPNTPL  60
   61 SNLLNLTDFH YLLASNVCRK AKRELLAVLI VTSYAGHDAL RSAHRQAIPQ SKLEEMGLRR 120
  121 VFLLAALPSR EHFISQDQLA SEQNRFGDLL QGNFIEDYRN LSYKHVMGLK WVSEECKKQA 180
  181 KFIIKLDDDI IYDVFHLRRY LETLEVREPG LATSSTLLSG YVLDAKPPIR LRANKWYVSK 240
  241 KEYPQALYPA YLSGWLYVTN VPTAERIVAE AERMSFFWID DTWLTGVVRT RLGIPLERHN 300
  301 DWFSANAEFI DCCVRDLKKH NYECEYSVGP NGGDDRLLVE FLHNVEKCYF DECVKRPVGK 360
  361 SLKETCLAAA KSRPPKHGFP EIKALRLR

Type	Start	End	Confidence
Signal Peptide	1	24	0.81
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	388	0.99